I tried to discuss that same point in [[laptop_wiki_with_git discussion|tips/laptop_wiki_with_git/discussion]].
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-> I have found you can use multiple setup files like this: `ikiwiki --setup COMMON.setup --setup MY.setup`. The options from the later one will override options from the previous.
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-> You should not use ikiwiki to edit your setup then and edit it manually. Not a problem for me.